🧰 ToolKit to launch COMOKIT on HPC https://comokit.org/docs/headless
  • Python 76.3%
  • R 13.8%
  • Shell 8.2%
  • Dockerfile 1.7%
Find a file
2021-02-17 16:07:11 +07:00
.github [ImgBot] Optimize images 2020-12-02 11:18:50 +00:00
docker [DOCKER] Add missing '.project' file 2020-10-12 15:17:42 +07:00
post-processing [PNG] Fix strong typing function 2021-01-18 15:22:17 +07:00
pre-processing [LIB] Fix scripts for full function independance 2021-01-06 17:34:41 +07:00
tools [TOOL] Add autoHeatmap alpha script 2021-02-17 16:07:11 +07:00
.gitignore [ignore] ignore DS_Store 2020-12-03 12:44:36 +01:00
.travis.yml [TRAVIS] Fix unparsed YAML 2021-01-07 10:13:23 +07:00
LICENSE Initial commit 2020-04-16 10:32:20 +07:00
README.md [README] Make folder name clickable 2020-05-25 18:40:07 +07:00

COMOKIT-HPC 🧰

Fight the COVID-19 with HPC
Explore the project »

Contributors · Issues · LGPL3 License
Travis Build Status · Docker Image CI

About The Project

You will find many useful ressources to run COMOKIT in headless on many kind of HPC

Repository

Here's the structure of the repository :

  • /docker/
    • Carry the COMOKIT docker image (downloadable here)
  • /pre-processing/
    • Scripts to prepare exploring models with GAMA-Headless and execution with SLURM Workload Manager
    • Mostly Python 3 scripts
  • /post-processing/
    • Scripts to gather and exploit data extracted from the exploration
    • Mostly R scripts
  • /tools/
    • Several small scripts to fix some commun problems with the project/headless usage
    • The doc will only be in the header of the file

Contributing

Contributions are what make the open source community such an amazing place to be learn, inspire, and create. Any contributions you make are greatly appreciated.

  1. Fork the Project
  2. Create your Feature Branch (git checkout -b feature/AmazingFeature)
  3. Commit your Changes (git commit -m 'Add some AmazingFeature')
  4. Push to the Branch (git push origin feature/AmazingFeature)
  5. Open a Pull Request

License

The COMOKIT project is distributed under the GPL-3.0 License. See LICENSE for more information.

These scripts are distributed under the LGPL-3.0 License. See LICENSE for more information.